Publications
Risk of global spread of Middle East respiratory syndrome coronavirus (MERS-CoV) via the air transport network.
J Travel Med, 2016; 23(6): taw063. 10.1093/jtm/taw063
Quantified degree of poultry exposure differs for human cases of avian influenza H5N1 and H7N9
Epidemiol Infect, 2016; 144(12): 2633-40. 10.1017/S0950268816001035
Finding Outbreak Trees in Networks with Limited Information
Netw Spat Econ, 2016; 16(2): 687–721. 10.1007/s11067-015-9294-6
Global risk of Zika virus depends critically on vector status of Aedes albopictus
Lancet Infect Dis, 2016; 16(5): 522-523. 10.1016/S1473-3099(16)00176-6
Moving towards a reliable HIV incidence test - current status, resources available, future directions and challenges ahead.
Epidemiol Infect, 2016; : 1-17. 10.1017/S0950268816002910
The long-term safety, public health impact, and cost-effectiveness of routine vaccination with a recombinant, live-attenuated dengue vaccine (Dengvaxia): a model comparison study.
PLoS Med, 2016; 13(11): e1002181. 10.1371/journal.pmed.1002181
Trends and determinants of human papillomavirus concordance among HIV-positive and HIV-negative heterosexual couples in Rakai, Uganda.
J Infect Dis, 2016; : jiw631. 10.1093/infdis/jiw631
Gram-Negative and Fungal Infections Following Mupirocin-Based Methicillin-Resistant Staphylococcus aureus Decolonization in Neonates.
Open Forum Infect Dis, 2016; 3 (Suppl 1): 694. 10.1093/ofid/ofw172.557
Feasibility of achieving the 2025 WHO global tuberculosis targets in South Africa, China, and India: a combined analysis of 11 mathematical models.
Lancet Glob Health, 2016; 4(11): e806-e815. 10.1016/S2214-109X(16)30199-1
Cost-effectiveness and resource implications of aggressive action on tuberculosis in China, India, and South Africa: a combined analysis of nine models.
Lancet Glob Health, 2016; 4(11): e816-e826. 10.1016/S2214-109X(16)30265-0
Immune Responses to an Oral Cholera Vaccine in Internally Displaced Persons in South Sudan.
Scientific Reports, 2016; 6: 35742. 10.1038/srep35742.
Cholera Rapid Test with Enrichment Step Has Diagnostic Performance Equivalent to Culture.
PLoS One, 2016; 11 (12): e0168257. 10.1371/journal.pone.0168257
Penile Immune Activation and Risk of HIV Shedding: A Prospective Cohort Study.
Clin Infect Dis, 2016; : . 10.1093/cid/ciw847
Reducing uncertainty about flavivirus infections.
Lancet Infect Dis, 2016; 17(1): 13-5. 10.1016/S1473-3099(16)30524-2
Improvements in the continuum of HIV care in an inner-city emergency department.
AIDS, 2016; 30(1): 113-120. 10.1097/QAD.0000000000000896
Use of Hepatitis C Virus (HCV) Immunoglobulin G Antibody Avidity as a Biomarker to Estimate the Population-Level Incidence of HCV Infection.
J Infect Dis, 2016; 214(3): 344-352. 10.1093/infdis/jiw005
Development and Evaluation of a Modified Fourth-Generation Human Immunodeficiency Virus Enzyme Immunoassay for Cross-Sectional Incidence Estimation in Clade B Populations.
AIDS Res Hum Retroviruses, 2016; 32(8): 756-762. doi: 10.1089/AID.2015.0198.
Community viral load, antiretroviral therapy coverage, and HIV incidence in India: a cross-sectional, comparative study.
Lancet HIV, 2016; 3(4): e183-90.. 10.1016/S2352-3018(16)00019-9
Detection of Acute and Early HIV-1 Infections in an HIV Hyper-Endemic Area with Limited Resources.
PLoS One, 2016; 11(10): e0164943. 10.1371/journal.pone.0164943
Antiretroviral drug use in a cross-sectional population survey in Africa: NIMH Project Accept (HPTN 043).
J Acquir Immune Defic Syndr, 2016; : . 10.1097/QAI.0000000000001229
The Impact of Viral Suppression and Viral Breakthrough on Limited-Antigen Avidity Assay Results in Individuals with Clade B HIV Infection.
AIDS Res Hum Retroviruses, 2016; : . 10.1089/AID.2016.0105
Comparing the Outcomes of Patients with Carbapenemase-Producing and Non-Carbapenemase-Producing Carbapenem-Resistant Enterobacteriaceae Bacteremia.
Clin Infect Dis, 2016; : . 10.1093/cid/ciw741
Phylogenetic insights into age-disparate partnerships and HIV.
Lancet HIV, 2016; 4(1): e8–e9. 10.1016/S2352-3018(16)30184-9
Chemokine Levels in the Penile Coronal Sulcus Correlate with HIV-1 Acquisition and Are Reduced by Male Circumcision in Rakai, Uganda.
PLoS Pathog, 2016; 12(11): e1006025. 10.1371/journal.ppat.1006025
Evaluation of hidden HIV infections in an urban ED with a rapid HIV screening program.
Am J Emerg Med, 2016; 34(2): 180-4. 10.1016/j.ajem.2015.10.002
HPTN 068: A Randomized Control Trial of a Conditional Cash Transfer to Reduce HIV Infection in Young Women in South Africa-Study Design and Baseline Results.
AIDS Behav, 2016; 20(9): 1863-82. 10.1007/s10461-015-1270-0
Parallel declines in HIV and hepatitis C virus prevalence, but not in herpes simplex virus type 2 infection: A 10-year, serial cross-sectional study in an inner-city emergency department.
J Clin Virol, 2016; 80: 93-7. 10.1016/j.jcv.2016.05.003
Transactional sex among young women in rural South Africa: prevalence, mediators and association with HIV infection.
J Int AIDS Soc, 2016; 19(1): 20749. 10.7448/IAS.19.1.20749
The effect of a conditional cash transfer on HIV incidence in young women in rural South Africa (HPTN 068): a phase 3, randomised controlled trial.
Lancet Glob Health, 2016; Dec;4(12): e978-e988. 10.1016/S2214-109X(16)30253-4
Identifying transmission clusters with Cluster Picker and HIV-TRACE.
AIDS Res Hum Retroviruses., 2016; : . 10.1089/AID.2016.0205
Impact of Age and Sex on CD4+ Cell Count Trajectories following Treatment Initiation: An Analysis of the Tanzanian HIV Treatment Database.
PLoS One, 2016; 11(10): e0164148. 10.1371/journal.pone.0164148
Quantifying Heterogeneous Malaria Exposure and Clinical Protection in a Cohort of Ugandan Children.
J Infect Dis, 2016; 214: 1072-108. 10.1093/infdis/jiw301
Benefits and risks of the Sanofi-Pasteur dengue vaccine: Modeling optimal deployment.
Science, 2016; 353(6303): 1033-1036. 10.1126/science.aaf9590
Enhanced use of phylogenetic data to inform public health approaches to HIV among men who have sex with men.
Sex Health, 2016; : . 10.1071/SH16056
Population-Level Effect of Cholera Vaccine on Displaced Populations, South Sudan, 2014.
Emerg Infect Dis, 2016; 22(6): 1067. 10.3201/eid2206.151592
Impact of interventions and the incidence of ebola virus disease in Liberia—implications for future epidemics.
Health Policy Plan, 2016; : . 10.1093/heapol/czw113
Times to key events in Zika virus infection and implications for blood donation: a systematic review.
Bull World Health Organ, 2016; 94: 841-849. 10.2471/BLT.16.174540
MRSA acquisition risk in an endemic NICU setting with an active surveillance culture and decolonization program.
J Hosp Infect, 2016; : . 10.1016/j.jhin.2016.10.022
Cholera cases cluster in time and space in Matlab, Bangladesh: implications for targeted preventive interventions.
Int J Epidemiol, 2016; : dyw267. 10.1093/ije/dyw267
A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda.
Elife, 2016; 5: e20492. 10.7554/eLife.20492