Publications
Cholera outbreak in Yemen.
Lancet Gastroenterol Hepatol., 2017; 2(11): 777. 10.1016/S2468-1253(17)30287-X
Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.
PLoS Biol, 2017; 15(7): e1002608. 10.1371/journal.pbio.2001855
Raising backyard poultry in rural Bangladesh: Financial and nutritional benefits, but persistent risky practices.
Transbound Emerg Dis, 2017; 64(5): 1454-1464. 10.1111/tbed.12536
A controlled trial to reduce the risk of human Nipah virus exposure in Bangladesh.
EcoHealth, 2017; : 1-17. 10.1007/s10393-017-1267-4
Outbreak of Sudden Death with Acute Encephalitis Syndrome Among Children Associated with Exposure to Lychee Orchards in Northern Bangladesh, 2012.
Am J Trop Med Hyg, 2017; 97(3): 949-957. 10.4269/ajtmh.16-0856
Infectious disease prediction with kernel conditional density estimation.
Stat Med, 2017; : . 10.1002/sim.7488
Convergence of Humans, Bats, Trees, and Culture in Nipah Virus Transmission, Bangladesh.
Emerg Infect Dis, 2017; 23(9): 1446-53. 10.3201/eid2309.161922
Opportunities and challenges in modeling emerging infectious diseases.
Science, 2017; 157(6347): 149-152. 10.1126/science.aam8335
Protection against cholera from killed whole-cell oral cholera vaccines: a systematic review and meta-analysis.
Lancet Infect Dis, 2017; : . 10.1016/S1473-3099(17)30359-6
Neighborhood-targeted and case-triggered use of a single dose of oral cholera vaccine in an urban setting: Feasibility and vaccine coverage.
PLOS Negl Trop Dis, 2017; : . 10.1371/journal.pntd.0005652
Impact of interventions and the incidence of Ebola virus disease in Liberia-implications for future epidemics.
Health Policy Plan, 2017; 32(4): 602. 10.1093/heapol/czw163
Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.
PLoS Biol, 2017; 15(6): e2001855. 10.1371/journal.pbio.2001855
HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences.
AIDS Res Hum Retroviruses, 2017; : . 10.1089/AID.2017.0061
Human immunodeficiency virus care cascade among sub-populations in Rakai, Uganda: an observational study.
J Int AIDS Soc, 2017; 20(1): 1-9. 10.7448/IAS.20.1.21590
Current and future trends in tuberculosis incidence in New York City: a dynamic modelling analysis.
Lancet Public Health, 2017; 2(7): e323-e330. 10.1016/S2468-2667(17)30119-6
Bacterial Infections in Neonates Following Mupirocin-Based MRSA Decolonization: A Multicenter Cohort Study.
Infect Control Hosp Epidemiol, 2017; 38(8): 930 – 9. 10.1017/ice.2017.108
The geography of measles vaccination in the African Great Lakes region.
Nat Commun, 2017; 8: 15585. 10.1038/ncomms15585.
Impact of interventions and the incidence of Ebola virus disease in Liberia- implications for future epidemics.
Health Policy Plan, 2017; 32(4): 602. doi.org/10.1093/heapol/czw163
What is a Hotspot Anyway?
Am J Trop Med Hyg, 2017; 96(6): 1270-73. 10.4269/ajtmh.16-0427
High Hepatitis E Seroprevalence Among Displaced Persons in South Sudan.
Am J Trop Med Hyg, 2017; 96(6): 1296-1301. 10.4269/ajtmh.16-0620
El Niño and the shifting geography of cholera in Africa.
Proc Natl Acad Sci U S A, 2017; 114(17): 4436-41. 10.1073/pnas.1617218114
Contact structure, mobility, environmental impact and behaviour: the importance of social forces to infectious disease dynamics and disease ecology.
Phil Trans R Soc B, 2017; 372(1719): 20160454. 10.1098/rstb.2016.0454
MDR-TB treatment as prevention: The projected population-level impact of expanded treatment for multidrug-resistant tuberculosis.
PLoS One, 2017; 12(3): e0172748. 10.1371/journal.pone.0172748
Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size.
Science, 2017; 355(6331): 1302-06. 10.1126/science.aaj9384
Prevalence and clinical presentation of Rickettsia, Coxiella, Leptospira, Bartonella and chikungunya virus infections among hospital-based febrile patients from December 2008 to November 2009 in Bangladesh.
BMC Infect Dis, 2017; 17(141): . 10.1186/s12879-017-2239-6
Hospital-based Surveillance for Rotavirus Gastroenteritis Among Young Children in Bangladesh: Defining the Potential Impact of a Rotavirus Vaccine Program
Pediatr Infect Dis J, 2017; 36(2): 168-72. 10.1097/INF.0000000000001381
Comparison of Maxim and Sedia Limiting Antigen Assay Performance for Measuring HIV Incidence
AIDS Res Hum Retroviruses, 2017; : . doi:10.1089/AID.2016.0245.
Demographics, epidemiology and the impact of vaccination campaigns in a measles-free world–Can elimination be maintained?
Vaccine, 2017; 35(11): 1488-93. 10.1016/j.vaccine.2017.02.008
Evaluating Hospital-Based Surveillance for Outbreak Detection in Bangladesh: Analysis of Healthcare Utilization Data.
PLoS Med, 2017; 14(1): e1002218. 10.1371/journal.pmed.1002218
Analysis of HIV Diversity in HIV-Infected Black Men Who Have Sex with Men (HPTN 061).
PLoS One, 2017; 11(12): e0167629. 10.1371/journal.pone.0167629
Factors Associated With the Control of Viral Replication and Virologic Breakthrough in a Recently Infected HIV-1 Controller.
EBioMedicine, 2017; pii: S2352-3964(17): 30038-5. 10.1016/j.ebiom.2017.01.034
Safety of a killed oral cholera vaccine (Shanchol) in pregnant women in Malawi: an observational cohort study.
Lancet Infect Dis, 2017; : . 10.1016/ S1473-3099(16)30523-0
Adapting to the global shortage of cholera vaccines: targeted single dose cholera vaccine in response to an outbreak in South Sudan.
Lancet Infect Dis, 2017; : . 10.1016/S1473-3099(16)30472-8
Elevated cytomegalovirus IgG antibody levels are associated with HIV-1 disease progression and immune activation.
AIDS, 2017; : . 10.1097/QAD.0000000000001412
Segmented polynomials for incidence rate estimation from prevalence data.
Stat Med. , 2017; 36(2): 334-344. 10.1002/sim.7130
A Systematic Review of the Comparative Epidemiology of Avian and Human Influenza A H5N1 and H7N9 - Lessons and Unanswered Questions.
Transbound Emerg Dis, 2016; 63(6): 602-620. 10.1111/tbed.12327
Risk of global spread of Middle East respiratory syndrome coronavirus (MERS-CoV) via the air transport network.
J Travel Med, 2016; 23(6): taw063. 10.1093/jtm/taw063
Quantified degree of poultry exposure differs for human cases of avian influenza H5N1 and H7N9
Epidemiol Infect, 2016; 144(12): 2633-40. 10.1017/S0950268816001035
Finding Outbreak Trees in Networks with Limited Information
Netw Spat Econ, 2016; 16(2): 687–721. 10.1007/s11067-015-9294-6
Global risk of Zika virus depends critically on vector status of Aedes albopictus
Lancet Infect Dis, 2016; 16(5): 522-523. 10.1016/S1473-3099(16)00176-6