Publications
The incubation period of hepatitis E genotype 1: insights from pooled analyses of travellers
Epidemiol Infect, 2018; 146(12): 1533-1536. 10.1017/S0950268818001097
Phylogenetic methods inconsistently predict direction of HIV transmission among heterosexual pairs in the HPTN052 cohort
J Infect Dis, 2018; : . 10.1093/infdis/jiy734
Characterizing the impact of spatial clustering of susceptibility for measles elimination
Vaccine, 2018; : . 10.1016/j.vaccine.2018.12.012
The interaction of HIV set-point viral load and subtype on disease progression.
AIDS Res Hum Retrovirus, 2018; : . 10.1089/AID.2018.0165
A Low-Cost, Community Knowledge Approach to Estimate Maternal and Jaundice-Associated Mortality in Rural Bangladesh
Am J Trop Med Hyg, 2018; : . 10.4269/ajtmh.17-0974
Case-Fatality Ratio of Blood Culture-Confirmed Typhoid Fever in Dhaka, Bangladesh.
J Infect Dis, 2018; 218(suppl_4): S222-S226. 10.1093/infdis/jiy543
Preparing for safety monitoring after rotavirus vaccine introduction – Assessment of baseline epidemiology of intussusception among children <2 years of age in four Asian countries
Vaccine, 2018; 36(50): 7593-7598. 10.1016/j.vaccine.2018.11.002
How frequently are hospitalized patients colonized with carbapenem-resistant Enterobacteriaceae (CRE) already on contact precautions for other indications?
Infect Control Hosp Epidemiol, 2018; : 1-3. 10.1017/ice.2018.236
Brief Report: Age-Disparate Relationships and HIV Prevalence Among Never Married Women in Rakai, Uganda
J Acquir Immune Defic Syndr, 2018; 79(4): 430–434. 10.1097/QAI.0000000000001832
Universal Target Capture of HIV Sequences From NGS Libraries
Front Microbiol, 2018; 9:2150: . 10.3389/fmicb.2018.02150
A Window Into the HIV Epidemic from a South African Emergency Department
AIDS Res Hum Retroviruses, 2018; : . 10.1089/aid.2018.0127
Dried Blood Spots Stored at Room Temperature Should Not Be Used for HIV Incidence Testing
AIDS Res Hum Retroviruses, 2018; : . 10.1089/aid.2018.0138
Ethical considerations in global HIV phylogenetic research
Lancet HIV, 2018; 5(11): e656-e666. 10.1016/S2352-3018(18)30134-6
Prevalence and mapping of hepatitis C infections among men who have sex with men in New York City
PLoS One, 2018; 13(7): e0200269. 10.1371/journal.pone.0200269
Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver
Virus Evol, 2018; 4(1): . 10.1093/ve/vey007
Does Partner Selection Mediate the Relationship Between School Attendance and HIV/Herpes Simplex Virus-2 Among Adolescent Girls and Young Women in South Africa: An Analysis of HIV Prevention Trials Network 068 Data
J Acquir Immune Defic Syndr, 2018; 79(1): 20-27. 10.1097/QAI.0000000000001766
Hepatitis C care continuum and associated barriers among people who inject drugs in Chennai, India
Int J Drug Policy, 2018; 57: 51-60. 10.1016/j.drugpo.2018.03.023
Sexually Transmitted Bedfellows: Exquisite Association Between HIV and Herpes Simplex Virus Type 2 in 21 Communities in Southern Africa in the HIV Prevention Trials Network 071 (PopART) Study
J Infect Dis, 2018; 218(3): 443-452. 10.1093/infdis/jiy178
Executive function associated with sexual risk in young South African women: Findings from the HPTN 068 cohort
PLoS One, 2018; 13(4): e0195217. 10.1371/journal.pone.0195217
Identification and validation of a multi-assay algorithm for cross-sectional HIV incidence estimation in populations with subtype C infection
J Int AIDS Soc, 2018; 21(2): e25082. 10.1002/jia2.25082
Comparison of Self-report to Biomarkers of Recent HIV Infection: Findings from the START Trial
AIDS Behav, 2018; 22(7): 2277-2283. 10.1007/s10461-018-2048-y
Hepatitis E Virus Seroprevalence and Correlates of Anti-HEV IgG Antibodies in the Rakai District, Uganda.
J Infect Dis, 2018; 217(5): 785-789. 10.1093/infdis/jix610
Association of Rapid Molecular Testing With Duration of Respiratory Isolation for Patients With Possible Tuberculosis in a US Hospital.
JAMA Intern Med, 2018; 178(10): 1380-1388. 10.1001/jamainternmed.2018.3638.
The 1918 Influenza Pandemic: Looking Back, Looking Forward
Am J Epidemiol, 2018; : . 10.1093/aje/kwy207
The Epidemiology of Cholera in Zanzibar: Implications for the Zanzibar Comprehensive Cholera Elimination Plan
J Infect Dis, 2018; 218(suppl_3): S173-S180. 10.1093/infdis/jiy500
Contact tracing performance during the Ebola epidemic in Liberia, 2014-2015
PLoS Negl Trop Dis, 2018; 12(9): e0006762. 10.1371/journal.pntd.0006762
Timescales of influenza A/H3N2 antibody dynamics
PLoS Biol, 2018; 16(8): e2004974. 10.1371/journal.pbio.2004974
Identifying Acceptable and Feasible Infection Control Interventions for Nipah Encephalitis Outbreaks in Bangladesh.
Am J Infect Control, 2018; 46(6): S24. 10.1016/j.ajic.2018.04.041
Avian influenza surveillance in domestic waterfowl and environment of live bird markets in Bangladesh, 2007–2012.
Sci Rep, 2018; 8(1): 9396. 10.1038/s41598-018-27515-w
An update from hospital-based surveillance for rotavirus gastroenteritis among young children in Bangladesh, July 2012 to June 2017.
Vaccine, 2018; : . 10.1016/j.vaccine.2018.05.032
Differential human mobility and local variation in human infection attack rate.
bioRxiv, 2018; : . 10.1101/291674
Challenges and opportunities in disease forecasting in outbreak settings: a case study of measles in Lola Prefecture, Guinea.
Am J Trop Med Hyg, 2018; 98(5): 1489 - 149. 10.4269/ajtmh.17-0218
Benefits and Challenges in Using Seroprevalence Data to Inform Models for Measles and Rubella Elimination.
J Infect Dis, 2018; 218(3): 355-364. 10.1093/infdis/jiy137
Reconstruction of antibody dynamics and infection histories to evaluate dengue risk.
Nature, 2018; 557 (7707): 719-23. 10.1038/s41586-018-0157-4
Revealing Measles Outbreak Risk With a Nested IgG Serosurvey in Madagascar .
Am J Epidemiol, 2018; : . 10.1093/aje/kwy114
Oral cholera vaccine in cholera prevention and control, Malawi.
Bull World Health Organ, 2018; 96: 428-435. 10.2471/BLT.17.207175
Near real-time forecasting for cholera decision making in Haiti after Hurricane Matthew.
PLoS Comput Biol, 2018; 14(5): e1006127. 10.1371/journal.pcbi.1006127
Cholera epidemic in Yemen, 2016-18: an analysis of surveillance data.
Lancet Glob Health, 2018; 6(6): e680-e690. 10.1016/S2214-109X(18)30230-4
Cholera Epidemic in South Sudan and Uganda and Need for International Collaboration in Cholera Control.
Emerg Infect Dis, 2018; 24(5): 883-887. 10.3201/eid2405.171651
Mapping the burden of cholera in sub-Saharan Africa and implications for control: an analysis of data across geographical scales.
Lancet, 2018; 391(10133): 1908-1915. 10.1016/S0140-6736(17)33050-7