Publications

Patel EU, Kirkpatrick AR, Grabowski MK, Kigozi G, Gray RH, Prodger JL, Redd AD, Nalugoda F, Serwadda D, Wawer MJ, Quinn TC, Tobian AAR.

Penile Immune Activation and Risk of HIV Shedding: A Prospective Cohort Study.

Clin Infect Dis, 2016; : . 10.1093/cid/ciw847

Kucharski A, Riley S.

Reducing uncertainty about flavivirus infections.

Lancet Infect Dis, 2016; 17(1): 13-5. 10.1016/S1473-3099(16)30524-2

Kelen GD, Hsieh YH, Rothman RE, Patel EU, Laeyendecker OB, Marzinke MA, Clarke W, Parsons T, Manucci JL, Quinn TC.

Improvements in the continuum of HIV care in an inner-city emergency department.

AIDS, 2016; 30(1): 113-120. 10.1097/QAD.0000000000000896

Patel EU, Cox AL, Mehta SH, Boon D, Mullis CE, Astemborski J, Osburn WO, Quinn J, Redd AD, Kirk GD, Thomas DL, Quinn TC, Laeyendecker O.

Use of Hepatitis C Virus (HCV) Immunoglobulin G Antibody Avidity as a Biomarker to Estimate the Population-Level Incidence of HCV Infection.

J Infect Dis, 2016; 214(3): 344-352. 10.1093/infdis/jiw005

Kirkpatrick AR, Patel EU, Celum CL, Moore RD, Blankson JN, Mehta SH, Kirk GD, Margolick JB, Quinn TC, Eshleman SH, Laeyendecker O.

Development and Evaluation of a Modified Fourth-Generation Human Immunodeficiency Virus Enzyme Immunoassay for Cross-Sectional Incidence Estimation in Clade B Populations.

AIDS Res Hum Retroviruses, 2016; 32(8): 756-762. doi: 10.1089/AID.2015.0198.

Solomon SS, Mehta SH, McFall AM, Srikrishnan AK, Saravanan S, Laeyendecker O, Balakrishnan P, Celentano DD, Solomon S, Lucas GM.

Community viral load, antiretroviral therapy coverage, and HIV incidence in India: a cross-sectional, comparative study.

Lancet HIV, 2016; 3(4): e183-90.. 10.1016/S2352-3018(16)00019-9

Mayaphi SH, Martin DJ, Quinn TC, Laeyendecker O, Olorunju SA, Tintinger GR, Stoltz AC.

Detection of Acute and Early HIV-1 Infections in an HIV Hyper-Endemic Area with Limited Resources.

PLoS One, 2016; 11(10): e0164943. 10.1371/journal.pone.0164943

Fogel JM, Clarke W, Kulich M, Piwowar-Manning E, Breaud A, Olson MT, Marzinke MA, Laeyendecker O, Fiamma A, Donnell D, Mbwambo JK, Richter L, Gray G, Sweat M, Coates TJ, Eshleman SH.

Antiretroviral drug use in a cross-sectional population survey in Africa: NIMH Project Accept (HPTN 043).

J Acquir Immune Defic Syndr, 2016; : . 10.1097/QAI.0000000000001229

Wendel SK, Longosz AF, Eshleman SH, Blankson J, Moore R, Kerully J, Quinn TC, Laeyendecker O.

The Impact of Viral Suppression and Viral Breakthrough on Limited-Antigen Avidity Assay Results in Individuals with Clade B HIV Infection.

AIDS Res Hum Retroviruses, 2016; : . 10.1089/AID.2016.0105

Tamma PD, Goodman KE, Harris AD, Tekle T, Roberts R, Taiwo A, Simner PJ.

Comparing the Outcomes of Patients with Carbapenemase-Producing and Non-Carbapenemase-Producing Carbapenem-Resistant Enterobacteriaceae Bacteremia.

Clin Infect Dis, 2016; : . 10.1093/cid/ciw741

Grabowski MK, Lessler J.

Phylogenetic insights into age-disparate partnerships and HIV.

Lancet HIV, 2016; 4(1): e8–e9. 10.1016/S2352-3018(16)30184-9

Prodger JL, Gray RH, Shannon B, Shahabi K, Kong X, Grabowski K, Kigozi G, Nalugoda F, Serwadda D, Wawer MJ, Reynolds SJ, Liu CM, Tobian AA, Kaul R.

Chemokine Levels in the Penile Coronal Sulcus Correlate with HIV-1 Acquisition and Are Reduced by Male Circumcision in Rakai, Uganda.

PLoS Pathog, 2016; 12(11): e1006025. 10.1371/journal.ppat.1006025

Hsieh YH, Kelen GD, Beck KJ, Kraus CK, Shahan JB, Laeyendecker OB, Quinn TC, Rothman RE.

Evaluation of hidden HIV infections in an urban ED with a rapid HIV screening program.

Am J Emerg Med, 2016; 34(2): 180-4. 10.1016/j.ajem.2015.10.002

Pettifor A, MacPhail C, Selin A, Gómez-Olivé FX, Rosenberg M, Wagner RG, Mabuza W, Hughes JP, Suchindran C, Piwowar-Manning E, Wang J, Twine R, Daniel T, Andrew P, Laeyendecker O, Agyei Y, Tollman S, Kahn K; HPTN 068 protocol team.

HPTN 068: A Randomized Control Trial of a Conditional Cash Transfer to Reduce HIV Infection in Young Women in South Africa-Study Design and Baseline Results.

AIDS Behav, 2016; 20(9): 1863-82. 10.1007/s10461-015-1270-0

Patel EU, Laeyendecker O, Hsieh YH, Rothman RE, Kelen GD, Quinn TC.

Parallel declines in HIV and hepatitis C virus prevalence, but not in herpes simplex virus type 2 infection: A 10-year, serial cross-sectional study in an inner-city emergency department.

J Clin Virol, 2016; 80: 93-7. 10.1016/j.jcv.2016.05.003

Ranganathan M, Heise L, Pettifor A, Silverwood RJ, Selin A, MacPhail C, Delany-Moretlwe S, Kahn K, Gómez-Olivé FX, Hughes JP, Piwowar-Manning E, Laeyendecker O, Watts C.

Transactional sex among young women in rural South Africa: prevalence, mediators and association with HIV infection.

J Int AIDS Soc, 2016; 19(1): 20749. 10.7448/IAS.19.1.20749

Pettifor A, MacPhail C, Hughes JP, Selin A, Wang J, Gómez-Olivé FX, Eshleman SH, Wagner RG, Mabuza W, Khoza N, Suchindran C, Mokoena I, Twine R, Andrew P, Townley E, Laeyendecker O, Agyei Y, Tollman S, Kahn K.

The effect of a conditional cash transfer on HIV incidence in young women in rural South Africa (HPTN 068): a phase 3, randomised controlled trial.

Lancet Glob Health, 2016; Dec;4(12): e978-e988. 10.1016/S2214-109X(16)30253-4

Rose R, Lamers SL, Dollar JJ, Grabowski MK, Hodcroft EB, Ragonnet-Cronin M, Wertheim JO, Redd AD, German D, Laeyendecker O.

Identifying transmission clusters with Cluster Picker and HIV-TRACE.

AIDS Res Hum Retroviruses., 2016; : . 10.1089/AID.2016.0205

Means AR, Risher K, Ujeneza EL, Maposa I, Nondi J, Bellan SE.

Impact of Age and Sex on CD4+ Cell Count Trajectories following Treatment Initiation: An Analysis of the Tanzanian HIV Treatment Database.

PLoS One, 2016; 11(10): e0164148. 10.1371/journal.pone.0164148

Rodriguez-Barraquer I, Arinaitwe E, Jagannathan P, Boyle MJ, Tappero J, Muhindo M, Kamya MR, Dorsey G, Drakeley C, Ssewanyana I, Smith DL, Greenhouse B.

Quantifying Heterogeneous Malaria Exposure and Clinical Protection in a Cohort of Ugandan Children.

J Infect Dis, 2016; 214: 1072-108. 10.1093/infdis/jiw301

Ferguson NM, Rodríguez-Barraquer I, Dorigatti I, Mier-y-Teran-Romero L, Laydon DJ, Cummings DAT.

Benefits and risks of the Sanofi-Pasteur dengue vaccine: Modeling optimal deployment.

Science, 2016; 353(6303): 1033-1036. 10.1126/science.aaf9590

German D, Grabowski MK, Beyrer C.

Enhanced use of phylogenetic data to inform public health approaches to HIV among men who have sex with men.

Sex Health, 2016; : . 10.1071/SH16056

Azman AS, Rumunu J, Abubakar A, West H, Ciglenecki I, Helderman T, Wamala JF, de la Rosa Vázquez O, Perea W, Sack DA, Legros D, Martin S, Lessler J, Luquero FJ.

Population-Level Effect of Cholera Vaccine on Displaced Populations, South Sudan, 2014.

Emerg Infect Dis, 2016; 22(6): 1067. 10.3201/eid2206.151592

Kirsch TD, Moseson H, Massaquoi M, Nyenswah TG, Goodermote R, Rodriguez-Barraquer I, Lessler J, Cumings DAT, Peters DH.

Impact of interventions and the incidence of ebola virus disease in Liberia—implications for future epidemics.

Health Policy Plan, 2016; : . 10.1093/heapol/czw113

Lessler J, Ott CT, Carcelen A, Konikoff JM, Williamson J, Bi Q, Kucirka LM, Cummings DAT, Reich NG, Chaisson LH.

Times to key events in Zika virus infection and implications for blood donation: a systematic review.

Bull World Health Organ, 2016; 94: 841-849. 10.2471/BLT.16.174540

Pierce R, Lessler J, Popoola VO, Milstone AM.

MRSA acquisition risk in an endemic NICU setting with an active surveillance culture and decolonization program.

J Hosp Infect, 2016; : . 10.1016/j.jhin.2016.10.022

Debes AK, Ali M, Azman AS, Yunus M, Sack DA.

Cholera cases cluster in time and space in Matlab, Bangladesh: implications for targeted preventive interventions.

Int J Epidemiol, 2016; : dyw267. 10.1093/ije/dyw267

Blanquart F, Grabowski MK, Herbeck J, Nalugoda F, Serwadda D, Eller MA, Robb ML, Gray R, Kigozi G, Laeyendecker O, Lythgoe KA, Nakigozi G, Quinn TC, Reynolds SJ, Wawer MJ, Fraser C.

A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda.

Elife, 2016; 5: e20492. 10.7554/eLife.20492

Grantz KH, Rane MS, Salje H, Glass GE, Schachterle SE, Cummings DAT.

Disparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918.

Proc Natl Acad Sci U S A, 2016; : . 10.1073/pnas.1612838113

Salje H, Lessler J, Kishor KP, Azman AS, Rahman MW, Rahman M, Cummings DAT, Gurley ES, Cauchemez S.

How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study.

Proc Natl Acad Sci U S A, 2016; : . 10.1073/pnas.1611391113

Johansson MA, Reich NG, Hota A, Brownstein JS, Santillana M.

Evaluating the performance of infectious disease forecasts: A comparison of climate-driven and seasonal dengue forecasts for Mexico.

Scientific Reports , 2016; 6: 33707. 10.1038/srep33707

Ferguson NM, Cucunubá ZM, Dorigatti I, Nedjati-Gilani GL, Donnelly CA, Basáñez MG, Nouvellet P, Lessler J.

Countering the Zika epidemic in Latin America

Science, 2016; 353(6297): 353-354. 10.1126/science.aag0219

Lessler J, Azman AS, Grabowski MK, Salje H, Rodriguez-Barraquer I.

Trends in the Mechanistic and Dynamic Modeling of Infectious Diseases.

Curr Epidemiol Rep, 2016; 3(3): 212-222. 10.1007/s40471-016-0078-4

Truelove S, Zhu H, Lessler J, Riley S, Read JM, Wang S, Kwok KO, Guan Y, Jiang CQ, Cummings DAT.

A comparison of hemagglutination inhibition and neutralization assays for characterizing immunity to seasonal influenza A.

Influenza Other Respir Viruses, 2016; 10(6): 518-524. 10.1111/irv.12408

Azman AS, Parker LA, Rumunu J, Tadesse F, Grandesso F, Deng LL, Lino RL, Bior BK, Lasuba M, Page AL, Ontweka L, Llosa AE, Cohuet S, Pezzoli L, Sodjinou DV, Abubakar A, Debes AK, Mpairwe AM, Wamala JF, Jamet C, Lessler J, Sack DA, Quilici ML, Ciglenecki I, Luquero FJ.

Heterogeneity of the HIV epidemic in agrarian, trading, and fishing communities in Rakai, Uganda: an observational epidemiological study.

Lancet HIV, 2016; 3: e388–96: . 10.1016/S2352-3018(16)30034-0

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