Publications
Isolation and Full-Genome Characterization of Nipah Viruses from Bats, Bangladesh
Emerg Infect Dis, 2019; 25(1): 166-170. 10.3201/eid2501.180267
The Cholera Phone: Diarrheal Disease Surveillance by Mobile Phone in Bangladesh
Am J Trop Med Hyg, 2019; 100(3): 510-516. 10.4269/ajtmh.18-0546
An epidemic of chikungunya in northwestern Bangladesh in 2011
PLoS One, 2019; 14(3): e0212218. 10.1371/journal.pone.0212218
Nationally-representative serostudy of dengue in Bangladesh allows generalizable disease burden estimates
Elife, 2019; : pii: e428. 10.7554/eLife.42869
Using healthcare-seeking behaviour to estimate the number of Nipah outbreaks missed by hospital-based surveillance in Bangladesh
Int J Epidemiol, 2019; : pii: dyz05. 10.1093/ije/dyz057
A decision-support framework to optimize border control for global outbreak mitigation
Sci Rep, 2019; 9(1): 2216. 10.1038/s41598-019-38665-w
Cross-sectional HIV Incidence Estimation Accounting for Heterogeneity Across Communities
Biometrics, 2019; : . 10.1111/biom.13046
Inconsistent temporal patterns of genetic variation of HCV among high-risk subjects may impact inference of transmission networks
Infect Genet Evol, 2019; 71: 1-6. 10.1016/j.meegid.2019.02.025
Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis
Nat Commun, 2019; 10(1): 1411. 10.1038/s41467-019-09139-4
The benefit of immediate compared to deferred ART on CD4+ Cell count recovery in early HIV infection
AIDS, 2019; : . 10.1097/QAD.0000000000002219
Integrated HIV testing, prevention, and treatment intervention for key populations in India: a cluster-randomised trial
Lancet HIV, 2019; : . 10.1016/S2352-3018(19)30034-7
What if They Don't Have Tuberculosis? The Consequences and Trade-offs Involved in False-positive Diagnoses of Tuberculosis
Clin Infect Dis, 2019; 68(1): 150-156. 10.1093/cid/ciy544
Yield and Efficiency of Novel Intensified Tuberculosis Case-Finding Algorithms for People Living with HIV
Am J Respir Crit Care Med, 2019; 199(5): 643-650. 10.1164/rccm.201803-0490OC
Spatially targeted screening to reduce tuberculosis transmission in high-incidence settings
Lancet Infect Dis, 2019; 19(3): e89-e95. 10.1016/S1473-3099(18)30443-2
Xpert at 8 years: where are we now, and what should we do next?
J Tuberc Lung Dis, 2019; 23(1): 3-4. 10.5588/ijtld.18.0717
Screening for tuberculosis: time to move beyond symptoms.
Lancet Respir Med, 2019; 7(3): 202-204. 10.1016/S2213-2600(19)30039-6
Gonorrhoea and chlamydia diagnosis as an entry point for HIV pre-exposure prophylaxis: a modelling study
BMJ, 2019; 9(3): e023453. 10.1136/bmjopen-2018-023453
Point-of-care C-reactive protein and risk of early mortality among adults initiating antiretroviral therapy
AIDS, 2019; : . 10.1097/QAD.0000000000002130
Estimating cholera incidence with cross-sectional serology
Sci Transl Med, 2019; 11(480): eaau6242. 10.1126/scitranslmed.aau6242
Genomic insights into the 2016-2017 cholera epidemic in Yemen
Nature, 2019; 565(7738): 230-233. 10.1038/s41586-018-0818-3
Projected population-wide impact of antiretroviral therapy-linked isoniazid preventive therapy in a high-burden setting
AIDS, 2019; 33(3): 525-536. 10.1097/QAD.0000000000002053
HIV subtype and Nef-mediated immune evasion function correlate with viral reservoir size in early-treated individuals
J Virol, 2019; : JVI.01832. 10.1128/JVI.01832-18
Validation of the Limiting Antigen Avidity Assay to Estimate Level and Trends in HIV Incidence in an A/D Epidemic in Rakai, Uganda.
AIDS Res Hum Retroviruses, 2019; : . 10.1089/AID.2018.0207
Benefits and Challenges in Using Seroprevalence Data to Inform Models for Measles and Rubella Elimination
J Infect Dis, 2018; 218(3): 355-364. 10.1093/infdis/jiy137
Reconstruction of antibody dynamics and infection histories to evaluate dengue risk
Nature, 2018; 557(7707): 719-723. 10.1038/s41586-018-0157-4
The potential impact of case-area targeted interventions in response to cholera outbreaks: A modeling study
PLoS Med, 2018; 15(2): e1002509. 10.1371/journal.pmed.1002509
Quantifying the Risk and Cost of Active Monitoring for Infectious Diseases
Sci Rep, 2018; 8(1): 1093. 10.1038/s41598-018-19406-x
A spatial regression model for the disaggregation of areal unit based data to high-resolution grids with application to vaccination coverage mapping
Stat Methods Med Res, 2018; : . 10.1177/0962280218797362
Inferring the risk factors behind the geographical spread and transmission of Zika in the Americas
PLoS Negl Trop Dis, 2018; 12(1): e0006194. 10.1371/journal.pntd.0006194
Cross-Sectional HIV Incidence Estimation with Missing Biomarkers
Stat Commun Infect Dis, 2018; 10(1): pii: 20170. 10.1515/scid-2017-0003
Screening for tuberculosis with Xpert MTB/RIF versus fluorescent microscopy among adults newly diagnosed with HIV in rural Malawi: a cluster randomized trial (CHEPETSA)
Clin Infect Dis, 2018; : . 10.1093/cid/ciy590
The Importance of Heterogeneity to the Epidemiology of Tuberculosis
Clin Infect Dis, 2018; : . doi: 10.1093/cid/ciy938
Tuberculosis Incidence Among Populations at High Risk in California, Florida, New York, and Texas
Am J Public Health, 2018; 108(S4): S311-S314. 10.2105/AJPH.2018.304503
Economic and epidemiologic impact of guidelines for early ART initiation irrespective of CD4 count in Spain
PLoS One, 2018; 13(11): e0206755. 10.1371/journal.pone.0206755
Simple Inclusion of Complex Diagnostic Algorithms in Infectious Disease Models for Economic Evaluation
Med Decis Making, 2018; 38(8): 930-941. 10.1177/0272989X18807438
Maternal Motivation to Take Preventive Therapy in Antepartum and Postpartum Among HIV-Positive Pregnant Women in South Africa: A Choice Experiment
AIDS Behav, 2018; : . 10.1007/s10461-018-2324-x
Cost-effectiveness of universal isoniazid preventive therapy among HIV-infected pregnant women in South Africa
Int J Tuberc Lung Dis, 2018; 22(12): 1435-1442. 10.5588/ijtld.18.0370
Progress and Challenges in Using Oral Cholera Vaccines to Control Outbreaks: The Médecins Sans Frontières Experience.
J Infect Dis, 2018; 218(suppl_3): S165-S166. 10.1093/infdis/jiy487
A Multisectoral Emergency Response Approach to a Cholera Outbreak in Zambia: October 2017-February 2018.
J Infect Dis, 2018; 218(suppl_3): S181-S183. 10.1093/infdis/jiy490
Evaluation of the SD bioline cholera rapid diagnostic test during the 2016 cholera outbreak in Lusaka, Zambia.
Trop Med Int Health, 2018; 23(8): 834-840. 10.1111/tmi.13084