Utazi CE, Thorley J, Alegana VA, Ferrari MJ, Takahashi S, Metcalf CJE, Lessler J, Cutts FT, Tatem AJ

Mapping vaccination coverage to explore the effects of delivery mechanisms and inform vaccination strategies

Nat Commun, 2019; 10(1): 1633. 10.1038/s41467-019-09611-1
Goodman KE, Lessler J, Harris AD, Milstone AM, Tamma PD

A methodological comparison of risk scores versus decision trees for predicting drug-resistant infections: A case study using extended-spectrum beta-lactamase (ESBL) bacteremia

Infect Control Hosp Epidemiol, 2019; 40(4): 400-407. 10.1017/ice.2019.17
Haw DJ, Cummings DA, Lessler, J, Salje H, Read JM, Riley S

Differential mobility and local variation in infection attack rate

PLoS Comput Biol, 2019; 15(1): e1006600. 10.1371/journal.pcbi.1006600
Li X, Mukandavire C, Cucunubá ZM, Abbas K, Clapham HE, Jit M, Johnson HL, Papadopoulos T, Vynnycky E, Brisson M, Carter ED, Clark A, Villiers MJ, Eilertson K, Ferrari MJ, Gamkrelidze I, Gaythorpe K, Grassly NC, Hallett TB, Jackson ML, Jean K, Karachaliou A, Klepac P, Lessler J, Li X, SM, Nayagam S, Nguyen DM, Razavi H, Razavi-Shearer D, Resch S, Sanderson C, Sweet S, Sy S, Tam Y, Tanvir H, Tran QM, Trotter CL, Truelove S, Zandvoort K, Verguet S, Walker N, Winter A, Ferguson NM, Garske T

Estimating the health impact of vaccination against 10 pathogens in 98 low and middle income countries from 2000 to 2030

medRxiv, 2019; : 19004358. 10.1101/19004358
Truelove SA, Keegan LT, Moss WJ, Chaisson LH, Macher E, Azman AS, Lessler J

Clinical and Epidemiological Aspects of Diphtheria: A Systematic Review and Pooled Analysis

Clin Infect Dis, 2019; : . 10.1093/cid/ciz808
Kaminsky J, Keegan LT, Metcalf CJE, Lessler J

Perfect counterfactuals for epidemic simulations

Philos Trans R Soc Lond B Biol Sci, 2019; 374(1776): 20180279. 10.1098/rstb.2018.0279
Hay JA, Minter A, Kylie Ainslie K, Lessler J, Kucharski AJ, Riley S

Serosolver: an open source tool to infer epidemiological and immunological dynamics from serological data

bioRxiv, 2019; : 730069. 10.1101/730069
Azman AS, Moore SM, Lessler J.

Surveillance and the global fight against cholera: Setting priorities and tracking progress

Vaccine, 2019; : . 10.1016/j.vaccine.2019.06.037
Lee EC, Azman AS, Kaminsky J, Moore SM, McKay HS, Lessler J

The impact of geographic targeting of oral cholera vaccination in sub-Saharan Africa: a modeling study

bioRxiv, 2019; : . 10.1101/617076
Borchering RK, Huang A, Mier-y-Teran-Romero L, Rojas DP, Rodriguez-Barraquer I, Katzelnick LC, Martinez SD, King GD, Cinkovich SC, Lessler J, Cummings DAT

Dengue after Zika: characterizing impacts of Zika emergence on endemic dengue transmission

bioRxiv, 2019; : 567537. 10.1101/567537
Azman AS, Ciglenecki I, Wamala JF, Lynch J, Aggarwal R, Rahman M, Wong S, Serafini M, Moussa AM, Dalton HR, Shrestha A, Pant R, Peck R, Gurley ES.

Hepatitis E should be considered a neglected tropical disease

PLoS Negl Trop Dis, 2019; 13(7): e0007453. 10.1371/journal.pntd.0007453
Das P, Sazzad HMS, Aleem MA, Rahman MZ, Rahman M, Anthony SJ, Lipkin WI, Gurley ES, Luby SP, Openshaw JJ

Hospital-based zoonotic disease surveillance in Bangladesh: design, field data and difficulties

Philos Trans R Soc Lond B Biol Sci, 2019; 374(1782): 2019001. 10.1098/rstb.2019.0019
Hong H, Dowdy DW, Dooley KE, Francis HW, Budhathoki C, Han HR, Farley JE

Aminoglycoside-Induced Hearing Loss Among Patients Being Treated for Drug-Resistant Tuberculosis in South Africa: A Prediction Model

Clin Infect Dis, 2019; : pii: ciz28. 10.1093/cid/ciz289
Campbell JR, Dowdy D, Schwartzman K

Treatment of latent infection to achieve tuberculosis elimination in low-incidence countries

PLoS Med, 2019; 16(6): e1002824. 10.1371/journal.pmed.1002824
Tampi RP, Tembo T, Mukumba-Mwenechanya M, Sharma A, Dowdy DW, Holmes CB, Bolton-Moore C, Sikazwe I, Tucker A, Sohn H

Operational characteristics of antiretroviral therapy clinics in Zambia: a time and motion analysis

BMC Health Serv Res, 2019; 19(1): 244. 10.1186/s12913-019-4096-z
Hanrahan CF, Nonyane BAS, Mmolawa L, West NS, Siwelana T, Lebina L, Martinson N, Dowdy DW

Contact tracing versus facility-based screening for active TB case finding in rural South Africa: A pragmatic cluster-randomized trial (Kharitode TB)

PLoS Med, 2019; 16(4): e1002796. 10.1371/journal.pmed.1002796
Kendall EA, Sahu S, Pai M, Fox GJ, Varaine F, Cox H, Cegielski JP, Mabote L, Vassall A, Dowdy DW

What will it take to eliminate drug-resistant tuberculosis?

Int J Tuberc Lung Dis, 2019; 23(5): 535-546. 10.5588/ijtld.18.0217
Pooran A, Theron G, Zijenah L, Chanda D, Clowes P, Mwenge L, Mutenherwa F, Lecesse P, Metcalfe J, Sohn H, Hoelscher M, Pym A, Peter J, Dowdy D, Dheda K

Point of care Xpert MTB/RIF versus smear microscopy for tuberculosis diagnosis in southern African primary care clinics: a multicentre economic evaluation

Lancet Glob Health, 2019; 7(6): e798-e807. 10.1016/S2214-109X(19)30164-0
Jo Y, Dowdy DW

The economic case for typhoid conjugate vaccines in countries with medium and high incidence of infection

Lancet Infect Dis, 2019; pii: S1473-3099(19): 30054-4. 10.1016/S1473-3099(19)30054-4
Sarkar A, Zlojutro A, Khan K, Gardner L

Measles resurgence in the USA: how international travel compounds vaccine resistance

Lancet Infect Dis, 2019; : . 10.1016/S1473-3099(19)30231-2
Nikolay B, Salje H,Hossain MJ, Khan, AKMD, Sazzad HMS, Rahman M, Daszak P, Ströher U, Pulliam JRC, Kilpatrick AM, Nichol ST, Klena JD, Sultana S,Afroj S, Luby SP, Cauchemez S, Gurley ES

Transmission of Nipah Virus — 14 Years of Investigations in Bangladesh

N Engl J Med, 2019; 380: 1804-1814. 10.1056/NEJMoa1805376
Anderson DE, Islam A, Crameri G, Todd S, Islam A, Khan SU, Foord A, Rahman MZ, Mendenhall IH, Luby SP, Gurley ES, Daszak P, Epstein JH, Wang LF

Isolation and Full-Genome Characterization of Nipah Viruses from Bats, Bangladesh

Emerg Infect Dis, 2019; 25(1): 166-170. 10.3201/eid2501.180267
Carstensen LS, Tamason CC, Sultana R, Tulsiani SM, Phelps MD, Gurley ES, Jensen PKM

The Cholera Phone: Diarrheal Disease Surveillance by Mobile Phone in Bangladesh

Am J Trop Med Hyg, 2019; 100(3): 510-516. 10.4269/ajtmh.18-0546
Haque F, Rahman M, Banu NN, Sharif AR, Jubayer S, Shamsuzzaman A, Alamgir A, Erasmus JH, Guzman H, Forrester N, Luby SP, Gurley ES.

An epidemic of chikungunya in northwestern Bangladesh in 2011

PLoS One, 2019; 14(3): e0212218. 10.1371/journal.pone.0212218
Salje H, Paul KK, Paul R, Rodriguez-Barraquer I, Rahman Z, Alam MS, Rahman M, Al-Amin HM, Heffelfinger J, Gurley E

Nationally-representative serostudy of dengue in Bangladesh allows generalizable disease burden estimates

Elife, 2019; : pii: e428. 10.7554/eLife.42869
Hegde ST, Salje H, Sazzad HMS, Hossain MJ, Rahman M, Daszak P, Klena JD, Nichol ST, Luby SP, Gurley ES

Using healthcare-seeking behaviour to estimate the number of Nipah outbreaks missed by hospital-based surveillance in Bangladesh

Int J Epidemiol, 2019; : pii: dyz05. 10.1093/ije/dyz057
Zlojutro A, Rey D, Gardner L

A decision-support framework to optimize border control for global outbreak mitigation

Sci Rep, 2019; 9(1): 2216. 10.1038/s41598-019-38665-w
Xu Y, Laeyendecker O, Wang R

Cross-sectional HIV Incidence Estimation Accounting for Heterogeneity Across Communities

Biometrics, 2019; : . 10.1111/biom.13046
Rose R, Rodriguez C, Dollar JJ, Lamers SL, Massaccesi G, Osburn W, Ray SC, Thomas DL, Cox AL, Laeyendecker O

Inconsistent temporal patterns of genetic variation of HCV among high-risk subjects may impact inference of transmission networks

Infect Genet Evol, 2019; 71: 1-6. 10.1016/j.meegid.2019.02.025
Ratmann O, Grabowski MK, Hall M, Golubchik T, Wymant C, Abeler-Dörner L, Bonsall D, Hoppe A, Brown AL, de Oliveira T, Gall A, Kellam P, Pillay D, Kagaayi J, Kigozi G, Quinn TC, Wawer MJ, Laeyendecker O, Serwadda D, Gray RH, Fraser C; PANGEA Consortium and Rakai Health Sciences Program.

Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis

Nat Commun, 2019; 10(1): 1411. 10.1038/s41467-019-09139-4
Sharma S, Schlusser KE, Torre P, Tambussi G, Draenert R, Pinto AN, Metcalf JA, Neaton JD, Laeyendecker O; INSIGHT START Study Group.

The benefit of immediate compared to deferred ART on CD4+ Cell count recovery in early HIV infection

AIDS, 2019; : . 10.1097/QAD.0000000000002219
Solomon SS, Solomon S, McFall AM, Srikrishnan AK, Anand S, Verma V, Vasudevan CK, Balakrishnan P, Ogburn EL, Moulton LH, Kumar MS, Sachdeva KS, Laeyendecker O, Celentano DD, Lucas GM, Mehta SH; Indian National Collaboration on AIDS Study.

Integrated HIV testing, prevention, and treatment intervention for key populations in India: a cluster-randomised trial

Lancet HIV, 2019; : . 10.1016/S2352-3018(19)30034-7
Houben RMGJ, Lalli M, Kranzer K, Menzies NA, Schumacher SG, Dowdy DW

What if They Don't Have Tuberculosis? The Consequences and Trade-offs Involved in False-positive Diagnoses of Tuberculosis

Clin Infect Dis, 2019; 68(1): 150-156. 10.1093/cid/ciy544
Yoon C, Semitala FC, Asege L, Katende J, Mwebe S, Andama AO, Atuhumuza E, Nakaye M, Armstrong DT, Dowdy DW, McCulloch CE, Kamya M, Cattamanchi A

Yield and Efficiency of Novel Intensified Tuberculosis Case-Finding Algorithms for People Living with HIV

Am J Respir Crit Care Med, 2019; 199(5): 643-650. 10.1164/rccm.201803-0490OC
Cudahy PGT, Andrews JR, Bilinski A, Dowdy DW, Mathema B, Menzies NA, Salomon JA, Shrestha S, Cohen T

Spatially targeted screening to reduce tuberculosis transmission in high-incidence settings

Lancet Infect Dis, 2019; 19(3): e89-e95. 10.1016/S1473-3099(18)30443-2
Dowdy DW

Xpert at 8 years: where are we now, and what should we do next?

J Tuberc Lung Dis, 2019; 23(1): 3-4. 10.5588/ijtld.18.0717
Yoon C, Dowdy DW, Esmail H, MacPherson P, Schumacher SG

Screening for tuberculosis: time to move beyond symptoms.

Lancet Respir Med, 2019; 7(3): 202-204. 10.1016/S2213-2600(19)30039-6
Kasaie P, Schumacher CM, Jennings JM, Berry SA, Tuddenham SA, Shah MS, Rosenberg ES, Hoover KW, Gift TL, Chesson H, German D, Dowdy DW

Gonorrhoea and chlamydia diagnosis as an entry point for HIV pre-exposure prophylaxis: a modelling study

BMJ, 2019; 9(3): e023453. 10.1136/bmjopen-2018-023453
Chaisson LH, Semitala FC, Asege L, Mwebe S, Katende J, Nakaye M, Andama AO, Marquez C, Atuhumuza E, Kamya M, Cattamanchi A, Yoon C

Point-of-care C-reactive protein and risk of early mortality among adults initiating antiretroviral therapy

AIDS, 2019; : . 10.1097/QAD.0000000000002130

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