Graboswki MK, Lessler J, Bazaale J, Nabukala D, Nakinga J, Nantume B, Ssekasanvu J, Raynolds SJ, Ssekubugu R, Nalugoda F, Kigozi G, Kagaayi J, Santelli J, Kennedy C, Wawer MJ, Serwadda D, Chang LW, Gray RH, the Rakai Health Sciences Program

Migration, hotspots, and dispersal of HIV infection in Rakai, Uganda

Nat Commun, 2020; 11(1): 976. 10.1038/s41467-020-14636-y
Zaman K, Dudman S, Stene-Johansen K, Qadri F, Yunus M, Sandbu S, Gurley ES, Overbo J, Julin CH, Dembinski JL, Nahar Q, Rahman A, Bhuiyan TR, Rahman M, Haque W, Khan J, Aziz A, Khanam M, Streatfield PK, Clemens JD

HEV study protocol : design of a cluster-randomised, blinded trial to assess the safety, immunogenicity and effectiveness of the hepatitis E vaccine HEV 239 (Hecolin) in women of childbearing age in rural Bangladesh

BMJ Open, 2020; 10(1): e033702. 10.1136/bmjopen-2019-033702
Nahar N,, Asaduzzaman M, Mandal UK, Rimi NA, Gurley ES, Rahman M, Garcia F, Zimicki S, Sultana R,, Luby SP

Hunting Bats for Human Consumption in Bangladesh

Ecohealth, 2020; : . 10.1007/s10393-020-01468-x
Paul RC, Nazneen A, Banik KC, Sumon SA, Paul KK, Akram A, Uzzaman MS, Iqbal T, Tejada-Strop A, Kamili S, Luby SP, Gidding HF, Hayen A, Gurley ES

Hepatitis E as a cause of adult hospitalization in Bangladesh: Results from an acute jaundice surveillance study in six tertiary hospitals, 2014-2017

PLoS Negl Trop Dis, 2020; 14(1): e0007586. 10.1371/journal.pntd.0007586
Capoferri AA, Lamers S, Grabowski M, Rose RR, Wawer M, Serwadda D, Gray R, Quinn TC, Kigozi G, Kagaayi J, Laeyendecker O

Recombination analysis of near full-length HIV-1 sequences and the identification of a potential new Circulating Recombinant Form from Rakai, Uganda

AIDS Res Hum Retroviruses, 2020; : . 10.1089/AID.2019.0150
Zhang Y, Wymant C, Laeyendecker O, Grabowski MK, Hall M, Hudelson S, Piwowar-Manning E, McCauley M, Gamble T, Hosseinipour MC, Kumarasamy N, Hakim JG, Kumwenda J, Mills LA, Santos BR, Grinsztejn B, Pilotto JH, Chariyalertsak S, Makhema J, Chen YQ, Cohen MS, Fraser C, Eshleman SH.

Evaluation of phylogenetic methods for inferring the direction of HIV transmission: HPTN 052

Clin Infect Dis, 2020; : . 10.1093/cid/ciz1247
Wallace M, Sharfstein J, Lessler J

Performance and Priorities: A Cross-sectional Study of Local Health Department Approaches to Essential Public Health Services

Public Health Rep, 2020; 135(1): 97-106. 10.1177/0033354919890862
Ratmann O, Kagaayi J, Hall M, Golubchick T, Kigozi G, Xi X, Wymant C, Nakigozi G, Abeler-Dörner L, Bonsall D, Gall A, Hoppe A, Kellam P, Bazaale J, Kalibbala S, Laeyendecker O, Lessler J, Nalugoda F, Chang LW, de Oliveira T, Pillay D, Quinn TC, Reynolds SJ, Spencer SEF, Ssekubugu R, Serwadda D, Wawer MJ, Gray RH, Fraser C, Grabowski MK; Rakai Health Sciences Program and the Pangea HIV Consortium.

Quantifying HIV transmission flow between high-prevalence hotspots and surrounding communities: a population-based study in Rakai, Uganda.

Lancet HIV, 2020; : . 10.1016/S2352-3018(19)30378-9
Haw DJ, Cummings DAT, Lessler J, Salje H, Read JM, Riley S

Differential mobility and local varation in attack rate

PLoS Comput Biol, 2019; 15(1): e1006600. 10.1371/journal.pcbi.1006600
Goin DE, Pearson RM, Craske MG, Stein A, Pettifor A,, Lippman SA, Kahn K, Neilands TB, Hamilton EL, Selin A, MacPhail C,, Wagner RG, Gomez-Olive FX, Twine R, Hughes JP, Agyei Y, Laeyendecker O, Tollman S, Ahern J

Depression and incident HIV in adolescent girls and young women in HPTN 068: Targets for prevention and mediating factors

Am J Epidemiol, 2019; : . 10.1093/aje/kwz238
Bi Q, Goodman KE, Kaminsky J, Lessler J

What Is Machine Learning: a Primer for the Epidemiologist

Am J Epidemiol, 2019; : . 10.1093/aje/kwz189
Radonovich LJ Jr, Simberkoff MS, Bessesen MT, Brown AC, Cummings DAT, Gaydos CA, Los JG, Krosche AE, Gibert CL, Gorse GJ, Nyquist AC, Reich NG, Rodriguez-Barradas MC, Price CS, Perl TM; ResPECT investigators((including Lessler J).

N95 Respirators vs Medical Masks for Preventing Influenza Among Health Care Personnel: A Randomized Clinical Trial

JAMA, 2019; 322(9): 824-833. 10.1001/jama.2019.11645
Johansson MA, Apfeldorf KM, Dobson S, Devita J, Buczak AL, Baugher B, Moniz LJ, Bagley T, Babin SM, Guven E, Yamana TK, Shaman J, Moschou T, Lothian N, Lane A, Osborne G, Jiang G, Brooks LC, Farrow DC, Hyun S, Tibshirani RJ, Rosenfeld R, Lessler J, Reich NG, Cummings DAT, Lauer SA, Moore SM, Clapham HE, Lowe R, Bailey TC, García-Díez M, Carvalho MS, Rodó X, Sardar T, Paul R, Ray EL, Sakrejda K, Brown AC, Meng X, Osoba O, Vardavas R, Manheim D, Moore M, Rao DM, Porco TC, Ackley S, Liu F, Worden L, Convertino M, Liu Y, Reddy A, Ortiz E, Rivero J, Brito H, Juarrero A, Johnson LR, Gramacy RB, Cohen JM, Mordecai EA, Murdock CC, Rohr JR, Ryan SJ,, Stewart-Ibarra AM, Weikel DP, Jutla A, Khan R, Poultney M, Colwell RR, Rivera-García B, , Bell JE, Biggerstaff M, Swerdlow D, Mier-Y-Teran-Romero L, Forshey BM, Trtanj J, Asher J, Clay M, Margolis HS, Hebbeler AM, George D, Chretien JP

An open challenge to advance probabilistic forecasting for dengue epidemics

Proc Natl Acad Sci U S A, 2019; 116(48): 24268-2427. 10.1073/pnas.1909865116
Bi Q, Goodman KE, Kaminsky J, Lessler J

What is Machine Learning? A Primer for the Epidemiologist

Am J Epidemiol, 2019; : . 10.1093/aje/kwz189
Giles JR, Salje H, Lessler J

The IDSpatialStats R Package: Quantifying Spatial Dependence of Infectious Disease Spread

The R Journal, 2019; : .
Truelove SA, Keegan LT, Moss WJ, Chaisson LH, Macher E, Azman AS, Lessler J

Clinical and Epidemiological Aspects of Diphtheria:A Systematic Review and Pooled Analysis

Clin Infect Dis, 2019; : . 10.1093/cid/ciz808
Lee EC, Azman AS, Kaminsky J, Moore SM, McKay HS, Lessler J

The projected impact of geographic targeting of oral cholera vaccination in sub-Saharan Africa: A modeling study

PLoS Med, 2019; 16(12): e1003003. 10.1371/journal.pmed.1003003
Hackman J, Falade-Nwulia O, Patel EU, Mehta SH, Kirk GD, Astemborski J, Ray SC, Thomas DL, Laeyendecker O

Correlates of hepatitis C viral clustering among people who inject drugs in Baltimore

Infect Genet Evol, 2019; 77: 104078. 10.1016/j.meegid.2019.104078
Fogel JM, Sivay MV, Cummings V, Wilson EA, Hart S, Gamble T, Laeyendecker O, Fernandez RE, Del Rio C, Batey DS, Mayer KH, Farley JE, McKinstry L, Hughes JP, Remien RH, Beyrer C, Eshleman SH

HIV drug resistance in a cohort of HIV-infected MSM in the United States

AIDS, 2019; 34(1): 91-101. 10.1097/QAD.0000000000002394
Hansoti B, Mwinnyaa G, Hahn E, Rao A, Black J, Chen V, Clark K, Clarke W, Eisenberg AL, Fernandez R, Iruedo J, Laeyendecker O, Maharaj R, Mda P, Miller J, Mvandaba N, Nyanisa Y, Reynolds SJ, Redd AD, Ryan S, Stead DF, Wallis LA, Quinn TC

Targeting the HIV Epidemic in South Africa: The Need for Testing and Linkage to Care in Emergency Departments

EClinicalMedicine, 2019; 15: 14-22. 10.1016/j.eclinm.2019.08.007
Hansoti B, Stead D, Eisenberg A, Mvandaba N, Mwinnyaa G, Patel EU, Parrish A, Reynolds SJ, Redd AD, Fernandez R, Rothman RE, Laeyendecker O, Quinn TC

A Window Into the HIV Epidemic from a South African Emergency Department

AIDS Res Hum Retroviruses, 2019; 35(2): 139-144. 10.1089/AID.2018.0127
Khoshnoodi M, Truelove S, Polydefkis M

Effect of diabetes type on long-term outcome of epidermal axon regeneration

Ann Clin Transl Neurol, 2019; 6(10): 2088-2096. 10.1002/acn3.50904
Li X, Mukandavire C, Cucunubá ZM, Abbas K,Clapham HE, Jit M, Johnson HL, Papadopoulos T, Vynnycky E, Brisson M, Carter ED, Clark A, de Villiers MJ, Eilertson K, Ferrari MJ, Gamkrelidze I, Gaythorpe K, Grassly NC, Hallett TB, Jackson ML, Jean K, Karachaliou A, Klepac P, Justin Lessler, Li X, Moore SM, Nayagam S, Nguyen DM, Razavi H, Razavi-Shearer D, Resch S, Sanderson C, Sweet S, Sy S, Tam Y, Tanvir H, Tran QM, Trotter CL, Truelove S, van Zandvoort K, Verguet S, Walker N, Winter A, Ferguson NM, Garske T(Vaccine Impact Modelling Consortium)

Estimating the health impact of vaccination against 10 pathogens in 98 low and middle income countries from 2000 to 2030

medRxiv, 2019; : . 10.1101/19004358
Mabvakure BM, Rott R, Dobrowsky L, Van Heusden P, Morris L, Scheepers C, Moore PL

Advancing HIV Vaccine Research With Low-Cost High-Performance Computing Infrastructure: An Alternative Approach for Resource-Limited Settings

Bioinform Biol Insights, 2019; 13: . 10.1177/1177932219882347
Liebig J ,Jansen C, Paini D,Gardner L, Jurdak R

A global model for predicting the arrival of imported dengue infections

PLoS One, 2019; 14(12): e0225193. 10.1371/journal.pone.0225193
Shrestha S, Cherng S, Hill AN, Reynolds S, Flood J, Barry PM, Readhead A, Oxtoby M, Lauzardo M, Privett T, Marks SM, Dowdy DW

Impact and Effectiveness of State-Level Tuberculosis Interventions in California, Florida, New York, and Texas: A Model-Based Analysis

Am J Epidemiol, 2019; 188(9): 1733-1741. 10.1093/aje/kwz147
Sohn H, Kasaie P, Kendall E, Gomez GB, Vassall A, Pai M, Dowdy D

Informing decision-making for universal access to quality tuberculosis diagnosis in India: an economic-epidemiological model

BMC Med, 2019; 17(1): 155. 10.1186/s12916-019-1384-8
Kendall EA, Malhotra S, Cook-Scalise S, Denkinger CM, Dowdy DW

Estimating the impact of a novel drug regimen for treatment of tuberculosis: a modeling analysis of projected patient outcomes and epidemiological considerations

BMC Infect Dis, 2019; 19(1): 794. 10.1186/s12879-019-4429-x
Campbell JR, Dowdy D, Schwartzman K

Treatment of latent infection to achieve tuberculosis elimination in low-incidence countries

PLoS Med, 2019; 16(6): e1002824. 10.1371/journal.pmed.1002824
Stracker N, Hanrahan C, Mmolawa L, Nonyane B, Tampi R, Tucker A, West N, Lebina L, Martinson N, Dowdy D

Risk factors for catastrophic costs associated with tuberculosis in rural South Africa

Int J Tuberc Lung Dis, 2019; 23(6): 756-763. 10.5588/ijtld.18.0519
Kendall EA, Kamoga C, Kitonsa PJ, Nalutaaya A, Salvatore PP, Robsky K, Nakasolya O, Mukiibi J, Isooba D, Cattamanchi A, Kato-Maeda M, Katamba A, Dowdy DW

Empiric treatment of pulmonary TB in the Xpert era: Correspondence of sputum culture, Xpert MTB/RIF, and clinical diagnoses

PLoS One, 2019; 14(7): e0220251. 10.1371/journal.pone.0220251
Am J Epidemiol

70 years of TB Prevention: Efficacy, Effectiveness, Toxicity, Durability and Duration

Am J Epidemiol, 2019; : . 10.1093/aje/kwz172
Kendall EA, Durovni B, Martinson NA, Cavalacante S, Masonoke K, Saraceni V, Lebina L, Efron A, Cohn S, Chon S, Chaisson RE, Dowdy DW, Golub JE; THRio and TEKO teams

Adherence to tuberculosis preventive therapy measured by urine metabolite testing among people with HIV

AIDS, 2019; : . 10.1097/QAD.0000000000002380
Chaisson LH, Saraceni V, Cohn S, Seabrook D, Cavalcante S, Chaisson RE, Golub J, Durovni B

CD4 count stratification to guide tuberculosis preventive therapy for people living with HIV

AIDS, 2019; : . 10.1097/QAD.0000000000002398
Nathavitharana RR, Yoon C, Macpherson P, Dowdy DW, Cattamanchi A, Somoskovi A, Broger T, Ottenhoff THM, Arinaminpathy N, Lonnroth K, Reither K, Cobelens F, Gilpin C, Denkinger CM, Schumacher SG

Guidance for Studies Evaluating the Accuracy of Tuberculosis Triage Tests

J Infect Dis, 2019; 220(Supplement_3): S116-S125. 10.1093/infdis/jiz243
Fojo AT, Dowdy DW

Ending the HIV Epidemic: Towards an Evidence-Based Approach

Clin Infect Dis, 2019; : . 10.1093/cid/ciz1018
Salvatore P, Johnson K, Vojnov L, Doherty M, Dowdy D

Clinical Consequences of Using an Indeterminate Range for Early Infant Diagnosis of HIV: A Decision Model

J Acquir Immune Defic Syndr, 2019; 82(3): 287-296. 10.1097/QAI.0000000000002155
Eshleman SH, Laeyendecker O, Kammers K, Chen A, Sivay MV, Kottapalli S, Sie BM, Yuan T, Monaco DR, Mohan D, Wansley D, Kula T, Morrison C, Elledge SJ, Brookmeyer R, Ruczinski I, Larman HB

Comprehensive Profiling of HIV Antibody Evolution

Cell Rep, 2019; 27(5): 1422-1433. 10.1016/j.celrep.2019.03.097
Morrison D, Laeyendecker O, Brookmeyer R

Cross-sectional HIV incidence estimation in an evolving epidemic

Stat Med, 2019; 38(19): 3614-3627. 10.1002/sim.8196
Stoner MCD, Neilands TB, Kahn K, Hughes JP, Gómez-Olivé FX, Twine R, Tollman S, Laeyendecker O, MacPhail C, Ahern J, Lippman SA, Pettifor A

Multilevel Measures of Education and Pathways to Incident Herpes Simplex Virus Type 2 in Adolescent Girls and Young Women in South Africa

J Adolesc Health, 2019; : . 10.1016/j.jadohealth.2019.06.008

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